Utils

The functions in this module are used by the other modules in the package.

• Highly variable genes
  • voyagerpy.utils.model_gene_var
  • voyagerpy.utils.get_top_hvgs
• Marker genes
  • voyagerpy.utils.find_markers
  • voyagerpy.utils.get_marker_genes
  • voyagerpy.utils.get_p_clusters
  • voyagerpy.utils.get_stat_clusters
• Utility functions
  • voyagerpy.utils.add_per_cell_qcmetrics
  • voyagerpy.utils.add_per_gene_qcmetrics
  • voyagerpy.utils.get_scale
  • voyagerpy.utils.is_highres
  • voyagerpy.utils.is_lowres
  • voyagerpy.utils.kurtosis
  • voyagerpy.utils.log_norm_counts
  • voyagerpy.utils.scale