Marker genes#

find_markers(adata[, hvg, hvg_string, cluster])

Return summary statistics on differentially expressed genes by groups defined in cluster.

get_marker_genes(adata[, hvg, hvg_string, ...])

Find marker genes for each cluster.

get_p_clusters(adata, clust[, skip_precalc, ...])

Get the p values for a given cluster.

get_stat_clusters(adata, clust[, cluster])

Get differential expression statistics on genes for a given cluster, against all other clusters.